P450:CYP98
From Metabolomics.JP
(Difference between revisions)
(New page: =98 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP98A1&&Sorghum bicolor&&GenEMBL AF029856 &&CYP98A2&&Glycine max (soybean)&&GenEMBL AF022458 (1704bp) &&CYP98A3&&Arabidopsi...) |
(New page: =98 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP98A1&&Sorghum bicolor&&GenEMBL AF029856 &&CYP98A2&&Glycine max (soybean)&&GenEMBL AF022458 (1704bp) &&CYP98A3&&Arabidopsi...) |
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=98 Family= | =98 Family= | ||
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&&CYP98A1&&Sorghum bicolor&&GenEMBL AF029856 | &&CYP98A1&&Sorghum bicolor&&GenEMBL AF029856 | ||
&&CYP98A2&&Glycine max (soybean)&&GenEMBL AF022458 (1704bp) | &&CYP98A2&&Glycine max (soybean)&&GenEMBL AF022458 (1704bp) | ||
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&&CYP98&&Adiantum capillus-veneris (maidenhair fern)&&BP913791 | &&CYP98&&Adiantum capillus-veneris (maidenhair fern)&&BP913791 | ||
&&CYP98&&Zamia fischeri (cycad)&&GenEMBL DY032099 EST | &&CYP98&&Zamia fischeri (cycad)&&GenEMBL DY032099 EST | ||
| − | |||
}} | }} | ||
Latest revision as of 20:00, 21 June 2009
| P450 Top (P450トップ) |
P450 Index (P450一覧) |
Arabidopsis (シロイヌナズナ) |
Oryza (イネ) |
Species-sequence information is taken from Cytochrome P450 Homepage by Dr. Nelson. (last update 2009/06/20)
[edit] 98 Family
| ID | Species | Family | Order | Description
|
|---|---|---|---|---|
| CYP98A1 | Poaceae | Poales | GenEMBL AF029856 | |
| CYP98A2 |
|
Fabaceae | Fabales | GenEMBL AF022458 (1704bp) |
| CYP98A3 |
|
Brassicaceae | Brassicales | GenEMBL AC002409 |
| CYP98A3 | Brassicaceae | Brassicales | DQ167183 | |
| CYP98A4 |
|
Poaceae | Poales | GenEMBL C74921 (EST) D47937 (EST) |
| CYP98A5 |
|
Fabaceae | Fabales | AY963109.1, CV670754.1 |
| CYP98A6 |
|
Boraginaceae | Lamiales | GenEMBL AB017418 |
| CYP98A7 | Poaceae | Poales | GenEMBL AI881302 and AI734373 EE295769.1 | |
| CYP98A7 | Poaceae | Poales | EU967060 | |
| CYP98A8 | Brassicaceae | Brassicales | GenEMBL AC011765 comp(67700-69163) | |
| CYP98A9 | Brassicaceae | Brassicales | GenEMBL AC011765 comp(70394-71887) | |
| CYP98A10 |
|
Poaceae | Poales | GenEMBL AJ439883 |
| CYP98A10 |
|
Poaceae | Poales | AJ583530 |
| CYP98A11 |
|
Poaceae | Poales | AJ583531 |
| CYP98A11 |
|
Poaceae | Poales | GenEMBL AJ439884 |
| CYP98A12 |
|
Poaceae | Poales | GenEMBL AJ439885 |
| CYP98A12 | Poaceae | Poales | AJ583532 | |
| CYP98A13v1 |
|
Lamiaceae | Lamiales | GenEMBL AY082611 |
| CYP98A13v2 |
|
Lamiaceae | Lamiales | GenEMBL AY082612 |
| CYP98A14 |
|
GenEMBL AJ427452 | ||
| CYP98A15PX |
|
Poaceae | Poales | aaaa01021379.1 CYP98A15P (indica cultivar-group) |
| CYP98A16P |
|
Poaceae | Poales | aaaa01016100.1 CYP98A16P (indica cultivar-group) |
| CYP98A17P |
|
Poaceae | Poales | aaaa01028453.1 CYP98A17 (indica cultivar-group) 66% to 98A3 |
| CYP98A18 |
|
Poaceae | Poales | aaaa01024345.1 CYP98A18 (indica cultivar-group) 76% to CYP98A4 |
| CYP98A15PX |
|
Poaceae | Poales | aaaa01021379.1 CYP98A15P (indica cultivar-group) |
| CYP98A19 | GenEMBL AY064170 | |||
| CYP98A20 | Pedaliaceae | Lamiales | GenEMBL AY065995 | |
| CYP98A21 |
|
Apiaceae | Apiales | GenEMBL AY532371.2 |
| CYP98A22 |
|
Rutaceae | Sapindales | No accession number |
| CYP98 |
|
CYP98 sequences have one extra intron compared to other CYP71 clan memebers. | ||
| CYP98A23 |
|
Salicaceae | Malpighiales | LG_XVI (-) 1542608-1539021 98A like 76% to 98A3 |
| CYP98A24 |
|
Salicaceae | Malpighiales | scaffold_1454 (+) 1851-5548 98A like 76% to 98A3 |
| CYP98A25v1 |
|
Salicaceae | Malpighiales | scaffold_3616 (+) 3009-5285 98A like 74% to 98A3 |
| CYP98A25v2 |
|
Salicaceae | Malpighiales | scaffold_21067 (+) 515-913 98A like 100% to scaffold_3616 (+) 4923 duplicate seq |
| CYP98A26 |
|
Salicaceae | Malpighiales | scaffold_3616 (+) 3-478 98A like runs off the end of the clone |
| CYP98A27 |
|
Salicaceae | Malpighiales | LG_VI (-) 1982315-1979658 98A like 81% to 98A3 |
| CYP98A27 |
|
Salicaceae | Malpighiales | AJ438351 |
| CYP98A28 |
|
Nyssaceae | Cornales | GenEMBL AY466856 |
| CYP98A29 | Poaceae | Poales | Assembled from GSS sequences | |
| CYP98A29 | Poaceae | Poales | EU953568 | |
| CYP98A30 |
|
Solanaceae | Solanales | No accession number |
| CYP98A31 |
|
Solanaceae | Solanales | No accession number |
| CYP98A32 |
|
Boraginaceae | Lamiales | No accession number |
| CYP98A33v1 |
|
Solanaceae | Solanales | No accession number |
| CYP98A33v2 |
|
Solanaceae | Solanales | No accession number |
| CYP98A34 |
|
Funariaceae | Funariales | GenEMBL ESTs BJ977736.1 mate BJ969431 |
| CYP98A35 |
|
Rubiaceae | Gentianales | GenEMBL DQ269126 |
| CYP98A36 |
|
Rubiaceae | Gentianales | GenEMBL DQ269127 |
| CYP98A37 |
|
Fabaceae | Fabales | GenEMBL DQ335791, GenPept ABC59086 |
| CYP98A38 | Selaginellaceae | Selaginellales | DN838382.1 cDNA | |
| CYP98A38 | Selaginellaceae | Selaginellales | GenEMBL AY843208 | |
| CYP98A39v1 | Poaceae | Poales | AJ585988 | |
| CYP98A39v2 | Poaceae | Poales | AJ585990 | |
| CYP98A39v3 | Poaceae | Poales | AJ585991 | |
| CYP98A40 | Poaceae | Poales | AJ585989 | |
| CYP98A41P | Poaceae | Poales | AJ585987 pseudogene | |
| CYP98A42 |
|
Pedaliaceae | Lamiales | No accession number |
| CYP98A43 |
|
Vitaceae | Vitales | AM435080.1 |
| CYP98A44 |
|
Fabaceae | Fabales | No accession number |
| CYP98A45 | Caricaceae | Brassicales | supercontig_92:531066,532751 | |
| CYP98A46 |
|
Ranunculaceae | Ranunculales | AB374410 |
| CYP98A47 |
|
Fabaceae | Fabales | See soybean pages |
| CYP98A48P |
|
Fabaceae | Fabales | See soybean pages |
| CYP98A49 |
|
Asteraceae | Asterales | No accession number |
| CYP98A (frag.) | Fabaceae | Fabales | AY963109 | |
| CYP98A (frag.) |
|
Lamiaceae | Lamiales | AY870921 |
| CYP98A (frag.) |
|
Boraginaceae | Lamiales | AY870917 |
| CYP98A (frag.) |
|
Lamiaceae | Lamiales | AY870916 |
| CYP98A (frag.) |
|
Asteraceae | Asterales | AJ438349 |
| CYP98A (frag.) |
|
Lamiaceae | Lamiales | AJ438347 |
| CYP98A (frag.) |
|
Myrtaceae | Myrtales | (CYP98A gene). |
| CYP98A |
|
Solanaceae | Solanales | AY870903.1 |
| CYP98A |
|
Solanaceae | Solanales | AY870898.1 |
| CYP98A |
|
Rubiaceae | Gentianales | GenEMBL DV713511 |
| CYP98A |
|
FD431762.1 65% to 98A4, 71% to 98A3 | ||
| CYP98A |
|
Magnoliaceae | Magnoliales | FD498143.1 78% to 98A3 |
| CYP98A |
|
Cucurbitaceae | Cucurbitales | AM722891.2 79% to CYP98A3 |
| CYP98A |
|
Juglandaceae | Fagales | EL898943.1 85% to 98A3 |
| CYP98A |
|
Rosaceae | Rosales | GenEMBL DY674676 EST |
| CYP98 |
|
Myrtaceae | Myrtales | GenEMBL BI097290 |
| CYP98 |
|
Rutaceae | Sapindales | GenEMBL DY280750.1 EST |
| CYP98A |
|
Malvaceae | Malvales | GenEMBL DT573702.1 EST |
| CYP98A |
|
Asteraceae | Asterales | GenEMBL DY961165.1 |
| CYP98A |
|
Ranunculaceae | Ranunculales | DR919401.1 EST |
| CYP98A |
|
Amaranthaceae | Caryophyllales | BE231372.1 |
| CYP98A |
|
Ericaceae | Ericales | DR067092.1 EST |
| CYP98A |
|
Zamiaceae | Cycadales | FD772571.1 68% to CYP98A34 moss |
| CYP98 |
|
Pteridaceae | Polypodiales | BP913791 |
| CYP98 |
|
Zamiaceae | Cycadales | GenEMBL DY032099 EST
|
[edit] Functions
- CYP98A, 4-coumaroyl-4'-hydroxyphenyllactate 3-hydroxylase
- CYP98A, p-coumarate 3'-hydroxylase
- CYP98A, p-coumaroyl shikimate 3'-hydroxylase
[edit] Links
- CYPedia CYP98 Functional Prediction (Cytochrome P450 Expression Database using Arabidopsis) by IBMP Strasbourg.
