User:Aritalab/UTRIP

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Contents

For Applicants

If you want to study in my laboratory, please do apply. My laboratory do not filter out applicants.

Important notice: My laboratory does NOT have experimental facility, only computers. If you want to do biological experiments, please do not apply for my lab.

Schedule

My laboratory accepts students in the 1st Crew (6/18-7/27). The official schedule of the UTRIP is here.

6/18 opening ceremony (I have a lecture for 13:00-15:00, but can join the event after that.)
6/19 campus tour
6/20-26 Lab work (I will be away for the latter half for a meeting in Indonesia.)
6/25-29 Lab work (Again I am away for a meeting in Washington DC.)
7/2-6 Lab work
7/9-13 Lab work
7/17-20 Lab work (The 18th is a national holiday here.)
7/23-25 Lab work
7/26 10 minutes presentation
7/27 closing ceremony

Research Topics

Following topics are not mandatory. If you prefer to bring in your own project, we are open to discuss.

Network Analysis

  • Metabolic network of Archaea
  • Metabolic network of sequenced species
Related articles

CW Chang, PC Lyu, M Arita (2011) BMC Bioinformatics 12:S27

Mass Spectra

For programming beginners
  • Design of spectral matching algorithm
For experts
  • Statistical assessment of spectral matching
Related articles

Horai et al. (2011) J Mass Spectrom 45:703-714

H Horai, M Arita, T Nishioka BMEI 2008

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