PKS:An13g02960

Latest revision as of 16:16, 23 April 2012

Aspergillus niger CBS 513.88 (GenBank XP_001396431) all species
Class	NRPKS (length: 904) all classes Class 29.NRPS-PKS_II in KS domain phylogeny	Reliability
Product		GeneName
UniProt,UniRef90	- , -	UniRef50	-
Domain by MAPSI	KS-AT (notation help / all patterns)
Domain by CDD	KS-AT (notation help / all patterns)
Domain by ITER-DB	{{{ITERDB}}} (notation help / all patterns)
Estimated Domain
Description	hypothetical protein An13g02960 [Aspergillus niger]
Information	Only KS and AT domain. Assigned as NRPKS type. Strong similarity to lovastatin nonaketide synthase lovB in Aspergillus terreus. Therefore it is assumed that it may encode an A. niger-specific polyketide synthase.
References
Link	AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

@@ Line 11: / Line 11: @@
 |MAPSI=KS-AT
 |CDD=KS-AT
-|class=-
+|class=NRPKS
 |reliability=
 |description=hypothetical protein An13g02960 [Aspergillus niger]
-|information=not used in KS-AT analysis�B Title: strong similarity to lovastatin nonaketide synthase lovB - Aspergillus terreus [truncated ORF]; Function: lovB of A. terreus is involved in polyketide synthesis-that is related to fatty acid metabolism and results in wide range of biologically active secondary metabolites-e. g. lovastatin-which inhibits HMG-CoA reductase.; Remark: lovB of A. terreus is encoded in a lovastatin biosynthesis cluster-which also contains other proteins involved in polyketide synthesis-e. g. lovC and lovF.; Remark: the predicted ORF is C-terminally truncated due to the contig border.; Similarity: the predicted ORF shows comparable similarity to lovB and lovF of A. terreus-therefore it is assumed-that it may encode an A. niger-specific polyketide synthase.?
+|information=Only KS and AT domain. Assigned as NRPKS type. Strong similarity to lovastatin nonaketide synthase lovB in Aspergillus terreus. Therefore it is assumed that it may encode an A. niger-specific polyketide synthase.
 |length=904
 }}
 {{{{NAMESPACE}}/Footer}}